Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Gm24891-201ENSMUST00000104391 136 ntBASIC11.79□□□□□ -0.52
Hoxa4P06798 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hoxa4P06798 Gm12501-201ENSMUST00000119163 529 ntBASIC11.79□□□□□ -0.52
Hoxa4P06798 Gm15207-201ENSMUST00000119259 442 ntBASIC11.79□□□□□ -0.52
Hoxa4P06798 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Hoxa4P06798 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxa4P06798 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Gm8815-201ENSMUST00000173809 620 ntBASIC11.79□□□□□ -0.52
Hoxa4P06798 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxa4P06798 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.79□□□□□ -0.52
Hoxa4P06798 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Rps4l-202ENSMUST00000204242 789 ntBASIC11.79□□□□□ -0.52
Hoxa4P06798 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.79□□□□□ -0.52
Hoxa4P06798 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxa4P06798 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.78□□□□□ -0.52
Hoxa4P06798 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hoxa4P06798 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hoxa4P06798 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hoxa4P06798 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Gm13035-201ENSMUST00000117496 342 ntBASIC11.78□□□□□ -0.52
Hoxa4P06798 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.78□□□□□ -0.52
Hoxa4P06798 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hoxa4P06798 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hoxa4P06798 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.78□□□□□ -0.52
Hoxa4P06798 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Gm5733-201ENSMUST00000190232 939 ntBASIC11.78□□□□□ -0.52
Hoxa4P06798 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.78□□□□□ -0.52
Hoxa4P06798 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.78□□□□□ -0.52
Hoxa4P06798 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.78□□□□□ -0.52
Hoxa4P06798 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hoxa4P06798 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hoxa4P06798 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hoxa4P06798 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.78□□□□□ -0.52
Hoxa4P06798 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Hoxa4P06798 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hoxa4P06798 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxa4P06798 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.77□□□□□ -0.52
Hoxa4P06798 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxa4P06798 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxa4P06798 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxa4P06798 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxa4P06798 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxa4P06798 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Hoxa4P06798 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hoxa4P06798 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.77□□□□□ -0.52
Hoxa4P06798 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa4P06798 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa4P06798 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa4P06798 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Hoxa4P06798 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Hoxa4P06798 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.77□□□□□ -0.53
Hoxa4P06798 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Hoxa4P06798 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Hoxa4P06798 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.77□□□□□ -0.53
Hoxa4P06798 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.77□□□□□ -0.53
Hoxa4P06798 Mir5120-201ENSMUST00000175020 78 ntBASIC11.77□□□□□ -0.53
Hoxa4P06798 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.77□□□□□ -0.53
Hoxa4P06798 Gm28686-201ENSMUST00000187404 609 ntBASIC11.77□□□□□ -0.53
Hoxa4P06798 Gm38314-201ENSMUST00000195709 625 ntBASIC11.77□□□□□ -0.53
Hoxa4P06798 Gm5714-201ENSMUST00000197343 566 ntBASIC11.77□□□□□ -0.53
Hoxa4P06798 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hoxa4P06798 Gm6867-201ENSMUST00000219165 425 ntBASIC11.77□□□□□ -0.53
Hoxa4P06798 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms