Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P06344 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.69□□□□□ -0.7
P06344 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P06344 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.69□□□□□ -0.7
P06344 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.68□□□□□ -0.7
P06344 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.68□□□□□ -0.7
P06344 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.68□□□□□ -0.7
P06344 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.68□□□□□ -0.7
P06344 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
P06344 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.68□□□□□ -0.7
P06344 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.68□□□□□ -0.7
P06344 Gm4607-201ENSMUST00000206649 577 ntBASIC10.68□□□□□ -0.7
P06344 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.68□□□□□ -0.7
P06344 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
P06344 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
P06344 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.68□□□□□ -0.7
P06344 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.68□□□□□ -0.7
P06344 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
P06344 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.68□□□□□ -0.7
P06344 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
P06344 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
P06344 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P06344 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.67□□□□□ -0.7
P06344 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.67□□□□□ -0.7
P06344 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.67□□□□□ -0.7
P06344 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
P06344 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
P06344 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
P06344 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC10.67□□□□□ -0.7
P06344 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.67□□□□□ -0.7
P06344 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.67□□□□□ -0.7
P06344 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.67□□□□□ -0.7
P06344 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
P06344 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.67□□□□□ -0.7
P06344 Mir5120-201ENSMUST00000175020 78 ntBASIC10.67□□□□□ -0.7
P06344 Mir7677-201ENSMUST00000184226 67 ntBASIC10.67□□□□□ -0.7
P06344 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.67□□□□□ -0.7
P06344 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.67□□□□□ -0.7
P06344 Gm43184-201ENSMUST00000197247 542 ntBASIC10.67□□□□□ -0.7
P06344 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
P06344 Gm270-201ENSMUST00000223010 976 ntBASIC10.67□□□□□ -0.7
P06344 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.67□□□□□ -0.7
P06344 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.67□□□□□ -0.7
P06344 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.67□□□□□ -0.7
P06344 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.67□□□□□ -0.7
P06344 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
P06344 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P06344 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms