Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PrnpP04925 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.38□□□□□ -0.43
PrnpP04925 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
PrnpP04925 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrnpP04925 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.38□□□□□ -0.43
PrnpP04925 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrnpP04925 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrnpP04925 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.38□□□□□ -0.43
PrnpP04925 Gm5451-201ENSMUST00000080545 579 ntBASIC12.38□□□□□ -0.43
PrnpP04925 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrnpP04925 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PrnpP04925 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrnpP04925 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrnpP04925 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrnpP04925 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrnpP04925 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrnpP04925 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrnpP04925 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrnpP04925 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.38□□□□□ -0.43
PrnpP04925 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
PrnpP04925 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrnpP04925 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PrnpP04925 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PrnpP04925 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
PrnpP04925 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
PrnpP04925 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
PrnpP04925 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.37□□□□□ -0.43
PrnpP04925 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
PrnpP04925 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
PrnpP04925 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 Gm25880-201ENSMUST00000104331 132 ntBASIC12.37□□□□□ -0.43
PrnpP04925 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 Gm13937-201ENSMUST00000121000 988 ntBASIC12.37□□□□□ -0.43
PrnpP04925 Gm9089-201ENSMUST00000122027 526 ntBASIC12.37□□□□□ -0.43
PrnpP04925 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.37□□□□□ -0.43
PrnpP04925 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.37□□□□□ -0.43
PrnpP04925 Gm24398-201ENSMUST00000157870 109 ntBASIC12.37□□□□□ -0.43
PrnpP04925 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.37□□□□□ -0.43
PrnpP04925 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 Gm8342-201ENSMUST00000209839 757 ntBASIC12.37□□□□□ -0.43
PrnpP04925 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
PrnpP04925 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.37□□□□□ -0.43
PrnpP04925 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.37□□□□□ -0.43
PrnpP04925 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.37□□□□□ -0.43
PrnpP04925 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
PrnpP04925 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
PrnpP04925 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.37□□□□□ -0.43
PrnpP04925 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PrnpP04925 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
PrnpP04925 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
PrnpP04925 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
PrnpP04925 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Gm12419-201ENSMUST00000116649 636 ntBASIC12.36□□□□□ -0.43
PrnpP04925 Gm11340-201ENSMUST00000119226 412 ntBASIC12.36□□□□□ -0.43
PrnpP04925 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.36□□□□□ -0.43
PrnpP04925 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
PrnpP04925 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
PrnpP04925 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.36□□□□□ -0.43
PrnpP04925 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Gm44315-201ENSMUST00000203041 219 ntBASIC12.36□□□□□ -0.43
PrnpP04925 Gm44158-201ENSMUST00000203881 505 ntBASIC12.36□□□□□ -0.43
PrnpP04925 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.36□□□□□ -0.43
PrnpP04925 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.36□□□□□ -0.43
PrnpP04925 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.36□□□□□ -0.43
PrnpP04925 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.36□□□□□ -0.43
PrnpP04925 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
PrnpP04925 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Gm23680-201ENSMUST00000083162 164 ntBASIC12.36□□□□□ -0.43
PrnpP04925 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.36□□□□□ -0.43
PrnpP04925 Olfr584-201ENSMUST00000098210 964 ntBASIC12.36□□□□□ -0.43
PrnpP04925 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PrnpP04925 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms