Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Gm17208-201ENSMUST00000168388 535 ntBASIC10.51□□□□□ -0.73
P04224 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
P04224 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Gm8099-201ENSMUST00000200510 742 ntBASIC10.51□□□□□ -0.73
P04224 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC10.51□□□□□ -0.73
P04224 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.51□□□□□ -0.73
P04224 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Gm8463-201ENSMUST00000208573 613 ntBASIC10.51□□□□□ -0.73
P04224 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
P04224 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.51□□□□□ -0.73
P04224 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.51□□□□□ -0.73
P04224 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
P04224 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
P04224 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
P04224 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.51□□□□□ -0.73
P04224 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
P04224 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
P04224 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.5□□□□□ -0.73
P04224 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
P04224 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
P04224 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
P04224 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
P04224 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
P04224 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
P04224 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.5□□□□□ -0.73
P04224 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.5□□□□□ -0.73
P04224 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Gm27437-201ENSMUST00000183429 107 ntBASIC10.5□□□□□ -0.73
P04224 Gm27701-201ENSMUST00000184498 110 ntBASIC10.5□□□□□ -0.73
P04224 Gm37922-201ENSMUST00000195596 455 ntBASIC10.5□□□□□ -0.73
P04224 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.5□□□□□ -0.73
P04224 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.5□□□□□ -0.73
P04224 Gm45668-201ENSMUST00000211271 493 ntBASIC10.5□□□□□ -0.73
P04224 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.5□□□□□ -0.73
P04224 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
P04224 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
P04224 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
P04224 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.5□□□□□ -0.73
P04224 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.5□□□□□ -0.73
P04224 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
P04224 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04224 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04224 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04224 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04224 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04224 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
P04224 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms