Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Hcn1O88704 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Hcn1O88704 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Hcn1O88704 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11.49□□□□□ -0.57
Hcn1O88704 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Gm17376-201ENSMUST00000166016 84 ntBASIC11.49□□□□□ -0.57
Hcn1O88704 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.49□□□□□ -0.57
Hcn1O88704 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Gm27243-201ENSMUST00000183964 521 ntBASIC11.49□□□□□ -0.57
Hcn1O88704 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.49□□□□□ -0.57
Hcn1O88704 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.49□□□□□ -0.57
Hcn1O88704 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Hcn1O88704 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.49□□□□□ -0.57
Hcn1O88704 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.49□□□□□ -0.57
Hcn1O88704 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Hcn1O88704 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.49□□□□□ -0.57
Hcn1O88704 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.49□□□□□ -0.57
Hcn1O88704 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hcn1O88704 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.49□□□□□ -0.57
Hcn1O88704 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Hcn1O88704 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.49□□□□□ -0.57
Hcn1O88704 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Hcn1O88704 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.49□□□□□ -0.57
Hcn1O88704 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hcn1O88704 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hcn1O88704 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.48□□□□□ -0.57
Hcn1O88704 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Hcn1O88704 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Hcn1O88704 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.48□□□□□ -0.57
Hcn1O88704 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.48□□□□□ -0.57
Hcn1O88704 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hcn1O88704 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.48□□□□□ -0.57
Hcn1O88704 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.48□□□□□ -0.57
Hcn1O88704 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.48□□□□□ -0.57
Hcn1O88704 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.48□□□□□ -0.57
Hcn1O88704 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.48□□□□□ -0.57
Hcn1O88704 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.48□□□□□ -0.57
Hcn1O88704 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.48□□□□□ -0.57
Hcn1O88704 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hcn1O88704 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.48□□□□□ -0.57
Hcn1O88704 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hcn1O88704 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hcn1O88704 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.48□□□□□ -0.57
Hcn1O88704 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Hcn1O88704 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Hcn1O88704 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hcn1O88704 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms