Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 Gm3283-201ENSMUST00000199319 1350 ntBASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 Gm5434-202ENSMUST00000222384 1451 ntBASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 Gm5434-201ENSMUST00000071825 1451 ntBASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 AC124581.3-201ENSMUST00000224270 1624 ntBASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nkx1-1G3UXB3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 AC140449.1-201ENSMUST00000214600 1459 ntBASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Gm7599-201ENSMUST00000121453 796 ntBASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Gm26424-201ENSMUST00000122530 104 ntBASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Gm24211-201ENSMUST00000158264 107 ntBASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Gm6485-201ENSMUST00000160676 439 ntBASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Gm17877-201ENSMUST00000192578 814 ntBASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Gm19002-201ENSMUST00000192649 1012 ntBASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Gm43582-201ENSMUST00000196149 343 ntBASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Gm45481-201ENSMUST00000209717 877 ntBASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 AC168279.1-201ENSMUST00000214611 382 ntBASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 AC172989.1-201ENSMUST00000226387 513 ntBASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 CT009713.5-203ENSMUST00000224218 2079 ntBASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nkx1-1G3UXB3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx1-1G3UXB3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.52□□□□□ -0.08
Nkx1-1G3UXB3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx1-1G3UXB3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx1-1G3UXB3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx1-1G3UXB3 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.52□□□□□ -0.08
Nkx1-1G3UXB3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx1-1G3UXB3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx1-1G3UXB3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx1-1G3UXB3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Nkx1-1G3UXB3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Nkx1-1G3UXB3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx1-1G3UXB3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nkx1-1G3UXB3 Gm15010-201ENSMUST00000117153 407 ntBASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Gm11783-201ENSMUST00000119549 885 ntBASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Gm12196-201ENSMUST00000120954 262 ntBASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Gm4887-201ENSMUST00000122230 1053 ntBASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Rpl15-ps4-201ENSMUST00000122372 606 ntBASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Gm24724-201ENSMUST00000158230 107 ntBASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Gm23046-201ENSMUST00000158369 284 ntBASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 AC154851.1-201ENSMUST00000221591 655 ntBASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Pfdn4-202ENSMUST00000075087 816 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nkx1-1G3UXB3 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 168.1 ms