Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn2B2RVW2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn2B2RVW2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn2B2RVW2 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.83□□□□□ -0.2
Clrn2B2RVW2 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn2B2RVW2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn2B2RVW2 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn2B2RVW2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clrn2B2RVW2 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Clrn2B2RVW2 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Gm14942-201ENSMUST00000119642 336 ntBASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Gm25951-201ENSMUST00000175330 64 ntBASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Gm37981-201ENSMUST00000194280 535 ntBASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Gm6450-201ENSMUST00000200896 574 ntBASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Gm45120-201ENSMUST00000208880 408 ntBASIC13.81□□□□□ -0.2
Clrn2B2RVW2 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Map1b-203ENSMUST00000223725 2669 ntBASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Clrn2B2RVW2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn2B2RVW2 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn2B2RVW2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn2B2RVW2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn2B2RVW2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clrn2B2RVW2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms