Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Gm10434-201ENSMUST00000101158 471 ntBASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Gm13316-201ENSMUST00000140537 691 ntBASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Gm27514-201ENSMUST00000183692 110 ntBASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.07□□□□□ -0.8
Trav5-4A0A075B652 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Gm37057-201ENSMUST00000192624 1916 ntBASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Gm24830-201ENSMUST00000102024 166 ntBASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Gm22018-201ENSMUST00000104357 131 ntBASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Mir1247-201ENSMUST00000116706 82 ntBASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Gm13875-201ENSMUST00000120162 282 ntBASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Gm13570-201ENSMUST00000140763 309 ntBASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Gm43433-201ENSMUST00000196573 481 ntBASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Gm26232-201ENSMUST00000083360 166 ntBASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav5-4A0A075B652 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms