Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm5051-201ENSMUST00000204085 485 ntBASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Gm15374-201ENSMUST00000119313 844 ntBASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Gm11667-201ENSMUST00000119828 486 ntBASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Gm15881-201ENSMUST00000148792 942 ntBASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Scn8aQ9WTU3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Gm14193-201ENSMUST00000105067 153 ntBASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Gm14071-201ENSMUST00000117817 509 ntBASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Gm14263-201ENSMUST00000117955 746 ntBASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Gm9211-201ENSMUST00000182882 975 ntBASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Scn8aQ9WTU3 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Scn8aQ9WTU3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms