Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chaf1aQ9QWF0 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chaf1aQ9QWF0 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chaf1aQ9QWF0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Chaf1aQ9QWF0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chaf1aQ9QWF0 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.47□□□□□ -0.25
Chaf1aQ9QWF0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 Gm13316-201ENSMUST00000140537 691 ntBASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 Gm44958-201ENSMUST00000203734 736 ntBASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.46□□□□□ -0.25
Chaf1aQ9QWF0 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Chaf1aQ9QWF0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Gm22018-201ENSMUST00000104357 131 ntBASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Gm11425-201ENSMUST00000119608 498 ntBASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Gm4986-201ENSMUST00000119731 549 ntBASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Gm14999-201ENSMUST00000121039 624 ntBASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Mir7085-201ENSMUST00000184353 66 ntBASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Gm45784-201ENSMUST00000188360 142 ntBASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Gm9396-201ENSMUST00000076703 567 ntBASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chaf1aQ9QWF0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chaf1aQ9QWF0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.44□□□□□ -0.26
Chaf1aQ9QWF0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chaf1aQ9QWF0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chaf1aQ9QWF0 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chaf1aQ9QWF0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chaf1aQ9QWF0 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chaf1aQ9QWF0 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chaf1aQ9QWF0 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chaf1aQ9QWF0 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chaf1aQ9QWF0 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chaf1aQ9QWF0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.44□□□□□ -0.26
Chaf1aQ9QWF0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Chaf1aQ9QWF0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Chaf1aQ9QWF0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chaf1aQ9QWF0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Chaf1aQ9QWF0 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms