Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup50Q9JIH2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup50Q9JIH2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nup50Q9JIH2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup50Q9JIH2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup50Q9JIH2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup50Q9JIH2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nup50Q9JIH2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.64□□□□□ -0.39
Nup50Q9JIH2 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Gm23270-201ENSMUST00000104055 131 ntBASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Gm15547-201ENSMUST00000122152 333 ntBASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Gm26956-201ENSMUST00000182176 986 ntBASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Mir7085-201ENSMUST00000184353 66 ntBASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Gm19187-201ENSMUST00000206781 892 ntBASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Gm10312-201ENSMUST00000078515 489 ntBASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Gm25857-201ENSMUST00000082788 129 ntBASIC12.63□□□□□ -0.39
Nup50Q9JIH2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nup50Q9JIH2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Gm27501-201ENSMUST00000183599 107 ntBASIC12.62□□□□□ -0.39
Nup50Q9JIH2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Gm8420-201ENSMUST00000097103 598 ntBASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup50Q9JIH2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup50Q9JIH2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup50Q9JIH2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup50Q9JIH2 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nup50Q9JIH2 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup50Q9JIH2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nup50Q9JIH2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup50Q9JIH2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup50Q9JIH2 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.61□□□□□ -0.39
Nup50Q9JIH2 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nup50Q9JIH2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms