Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm28882-201ENSMUST00000185504 314 ntBASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Lect2-202ENSMUST00000225183 823 ntBASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ssu72Q9CY97 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Gm14928-201ENSMUST00000120198 477 ntBASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Ssu72Q9CY97 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gm5419-201ENSMUST00000119301 527 ntBASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gm12164-201ENSMUST00000121695 551 ntBASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gm6222-202ENSMUST00000182143 629 ntBASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gm29127-201ENSMUST00000188304 517 ntBASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.86□□□□□ -0.51
Ssu72Q9CY97 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms