Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ddx47Q9CWX9 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Gm43002-201ENSMUST00000200310 155 ntBASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ddx47Q9CWX9 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Gm15823-201ENSMUST00000064305 670 ntBASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ddx47Q9CWX9 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.28□□□□□ -0.44
Ddx47Q9CWX9 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx47Q9CWX9 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx47Q9CWX9 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx47Q9CWX9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx47Q9CWX9 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ddx47Q9CWX9 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx47Q9CWX9 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Ddx47Q9CWX9 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx47Q9CWX9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.28□□□□□ -0.44
Ddx47Q9CWX9 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx47Q9CWX9 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms