Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Gm23062-201ENSMUST00000102349 110 ntBASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Gm16166-201ENSMUST00000118291 787 ntBASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Gm25226-201ENSMUST00000158198 123 ntBASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Gm26134-201ENSMUST00000178484 110 ntBASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Col25a1Q99MQ5 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Gm12684-201ENSMUST00000118675 999 ntBASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Gm15566-201ENSMUST00000121130 590 ntBASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Col25a1Q99MQ5 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col25a1Q99MQ5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col25a1Q99MQ5 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col25a1Q99MQ5 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.46□□□□□ -0.41
Col25a1Q99MQ5 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col25a1Q99MQ5 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.46□□□□□ -0.41
Col25a1Q99MQ5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col25a1Q99MQ5 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col25a1Q99MQ5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col25a1Q99MQ5 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Col25a1Q99MQ5 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col25a1Q99MQ5 Gm11996-201ENSMUST00000117538 915 ntBASIC12.46□□□□□ -0.41
Col25a1Q99MQ5 Gm12961-201ENSMUST00000120507 1050 ntBASIC12.46□□□□□ -0.41
Col25a1Q99MQ5 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms