Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Gm28324-201ENSMUST00000187913 264 ntBASIC10.56□□□□□ -0.72
Scrt1Q99M85 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Gm9132-201ENSMUST00000210182 832 ntBASIC10.56□□□□□ -0.72
Scrt1Q99M85 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.56□□□□□ -0.72
Scrt1Q99M85 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.56□□□□□ -0.72
Scrt1Q99M85 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Scrt1Q99M85 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.56□□□□□ -0.72
Scrt1Q99M85 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.56□□□□□ -0.72
Scrt1Q99M85 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Scrt1Q99M85 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.55□□□□□ -0.72
Scrt1Q99M85 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.55□□□□□ -0.72
Scrt1Q99M85 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Gm11989-201ENSMUST00000117240 672 ntBASIC10.55□□□□□ -0.72
Scrt1Q99M85 Gm11362-201ENSMUST00000118838 850 ntBASIC10.55□□□□□ -0.72
Scrt1Q99M85 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Gm25072-201ENSMUST00000175233 235 ntBASIC10.55□□□□□ -0.72
Scrt1Q99M85 Gm8492-201ENSMUST00000182375 987 ntBASIC10.55□□□□□ -0.72
Scrt1Q99M85 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC10.55□□□□□ -0.72
Scrt1Q99M85 Gm18038-201ENSMUST00000197900 485 ntBASIC10.55□□□□□ -0.72
Scrt1Q99M85 Gm9463-201ENSMUST00000206707 601 ntBASIC10.55□□□□□ -0.72
Scrt1Q99M85 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Gm17827-201ENSMUST00000211825 742 ntBASIC10.55□□□□□ -0.72
Scrt1Q99M85 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Scrt1Q99M85 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.55□□□□□ -0.72
Scrt1Q99M85 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Scrt1Q99M85 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.54□□□□□ -0.72
Scrt1Q99M85 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Scrt1Q99M85 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms