Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Gm25700-201ENSMUST00000177693 110 ntBASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Gm18711-201ENSMUST00000199341 750 ntBASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdha3Q91Y16 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Gm11989-201ENSMUST00000117240 672 ntBASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Gm11362-201ENSMUST00000118838 850 ntBASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Gm2383-201ENSMUST00000181461 807 ntBASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Gm18056-201ENSMUST00000207670 568 ntBASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Gm18061-201ENSMUST00000208350 562 ntBASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Gm18063-201ENSMUST00000208529 568 ntBASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Gm18052-201ENSMUST00000208750 559 ntBASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.56□□□□□ -0.4
Pcdha3Q91Y16 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdha3Q91Y16 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms