Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gm42464-201ENSMUST00000196717 417 ntBASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gm42599-201ENSMUST00000201308 469 ntBASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gm26035-201ENSMUST00000083065 308 ntBASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb3Q91XZ7 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Gm24644-201ENSMUST00000157114 139 ntBASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 AC154424.1-201ENSMUST00000225883 799 ntBASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb3Q91XZ7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Gm12957-201ENSMUST00000117835 377 ntBASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Gm15937-201ENSMUST00000120727 1235 ntBASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb3Q91XZ7 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms