Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Gm42693-201ENSMUST00000196779 631 ntBASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Pcdhga3Q91XY5 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Gm15370-201ENSMUST00000117158 253 ntBASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Gm42599-201ENSMUST00000201308 469 ntBASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Gm7399-201ENSMUST00000032395 858 ntBASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Pcdhga3Q91XY5 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Gm12241-201ENSMUST00000118330 726 ntBASIC10.72□□□□□ -0.69
Pcdhga3Q91XY5 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms