Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm45509-201ENSMUST00000209624 1229 ntBASIC12.87□□□□□ -0.35
TraipQ8VIG6 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.87□□□□□ -0.35
TraipQ8VIG6 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.87□□□□□ -0.35
TraipQ8VIG6 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Gm15207-201ENSMUST00000119259 442 ntBASIC12.86□□□□□ -0.35
TraipQ8VIG6 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC12.86□□□□□ -0.35
TraipQ8VIG6 Gm15595-201ENSMUST00000120840 961 ntBASIC12.86□□□□□ -0.35
TraipQ8VIG6 Gm12176-201ENSMUST00000121420 875 ntBASIC12.86□□□□□ -0.35
TraipQ8VIG6 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Gm15881-201ENSMUST00000148792 942 ntBASIC12.86□□□□□ -0.35
TraipQ8VIG6 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.86□□□□□ -0.35
TraipQ8VIG6 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
TraipQ8VIG6 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.86□□□□□ -0.35
TraipQ8VIG6 Gm6867-201ENSMUST00000219165 425 ntBASIC12.86□□□□□ -0.35
TraipQ8VIG6 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.86□□□□□ -0.35
TraipQ8VIG6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TraipQ8VIG6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
TraipQ8VIG6 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms