Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gm7722-201ENSMUST00000120646 741 ntBASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gm20482-202ENSMUST00000174729 825 ntBASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gm38241-201ENSMUST00000192641 898 ntBASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gm44651-201ENSMUST00000207343 372 ntBASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gm45598-202ENSMUST00000210719 986 ntBASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gm9257-201ENSMUST00000221254 232 ntBASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim29Q8R2Q0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Gm14723-201ENSMUST00000118686 215 ntBASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Gm17931-201ENSMUST00000208132 634 ntBASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim29Q8R2Q0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 Rprl1-202ENSMUST00000198476 238 ntBASIC13.68□□□□□ -0.22
Trim29Q8R2Q0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms