Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Ddx54Q8K4L0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Gm23255-201ENSMUST00000102244 110 ntBASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Gm9166-201ENSMUST00000120293 561 ntBASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Gm5706-201ENSMUST00000181525 993 ntBASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Gm37782-201ENSMUST00000194879 678 ntBASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Gm7504-201ENSMUST00000201449 424 ntBASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Gm7940-201ENSMUST00000218195 769 ntBASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 CT030652.1-201ENSMUST00000227377 1235 ntBASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Ddx54Q8K4L0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Gng5-ps-201ENSMUST00000120931 205 ntBASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Gm9791-201ENSMUST00000060997 447 ntBASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx54Q8K4L0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Gm44260-201ENSMUST00000204946 2094 ntBASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Gm25554-201ENSMUST00000158075 113 ntBASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Gm24809-201ENSMUST00000175318 271 ntBASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Gm7741-201ENSMUST00000181445 989 ntBASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Gm7069-201ENSMUST00000182418 1008 ntBASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Gm44216-201ENSMUST00000203942 157 ntBASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Gm44882-201ENSMUST00000205702 802 ntBASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 CT009527.1-201ENSMUST00000224205 339 ntBASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Gm29100-201ENSMUST00000187564 4410 ntBASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx54Q8K4L0 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms