Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.17□□□□□ -0.14
Nup88Q8CEC0 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup88Q8CEC0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup88Q8CEC0 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup88Q8CEC0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nup88Q8CEC0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nup88Q8CEC0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.17□□□□□ -0.14
Nup88Q8CEC0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Gm14208-201ENSMUST00000119645 678 ntBASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Gm11597-201ENSMUST00000121423 964 ntBASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Gm27023-201ENSMUST00000182372 285 ntBASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Gm4034-201ENSMUST00000187674 480 ntBASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Gm37986-201ENSMUST00000193285 383 ntBASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 AC154222.2-201ENSMUST00000225848 607 ntBASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nup88Q8CEC0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 B9d1os-201ENSMUST00000137010 674 ntBASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Mir6979-201ENSMUST00000183927 56 ntBASIC14.15□□□□□ -0.14
Nup88Q8CEC0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Nup88Q8CEC0 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Gm24845-201ENSMUST00000158034 109 ntBASIC14.14□□□□□ -0.15
Nup88Q8CEC0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Gm25732-201ENSMUST00000175168 60 ntBASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Gm44262-201ENSMUST00000204969 372 ntBASIC14.14□□□□□ -0.15
Nup88Q8CEC0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms