Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Gm24548-201ENSMUST00000158650 108 ntBASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Mospd4-201ENSMUST00000180618 576 ntBASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Gm37489-201ENSMUST00000191883 159 ntBASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Gm38158-201ENSMUST00000194617 339 ntBASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc87Q8CDL9 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Gm12241-201ENSMUST00000118330 726 ntBASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Gm13786-201ENSMUST00000122371 333 ntBASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Gm9368-201ENSMUST00000219348 831 ntBASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc87Q8CDL9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Gm15370-201ENSMUST00000117158 253 ntBASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Gm45925-201ENSMUST00000218882 744 ntBASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Gm22058-201ENSMUST00000083393 310 ntBASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc87Q8CDL9 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms