Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Gm14999-201ENSMUST00000121039 624 ntBASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Lysmd4Q8CC84 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Gm4984-201ENSMUST00000115987 360 ntBASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Gm13570-201ENSMUST00000140763 309 ntBASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Gm5035-201ENSMUST00000215581 927 ntBASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Gm6091-201ENSMUST00000098307 165 ntBASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Lysmd4Q8CC84 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Lysmd4Q8CC84 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms