Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm15004-201ENSMUST00000119192 630 ntBASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.21□□□□□ -0.29
Trim9Q8C7M3 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Trim9Q8C7M3 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.21□□□□□ -0.3
Trim9Q8C7M3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Trim9Q8C7M3 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Trim9Q8C7M3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim9Q8C7M3 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim9Q8C7M3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim9Q8C7M3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim9Q8C7M3 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim9Q8C7M3 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim9Q8C7M3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Gm6114-201ENSMUST00000182472 968 ntBASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim9Q8C7M3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Gm25668-201ENSMUST00000157700 129 ntBASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Gm5616-201ENSMUST00000165252 384 ntBASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Gm8741-201ENSMUST00000174736 384 ntBASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Gm19287-201ENSMUST00000203190 358 ntBASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Gm6082-201ENSMUST00000215204 454 ntBASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim9Q8C7M3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.19□□□□□ -0.3
Trim9Q8C7M3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms