Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Gm15573-201ENSMUST00000119487 540 ntBASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Gm15595-201ENSMUST00000120840 961 ntBASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Gm44124-201ENSMUST00000204159 472 ntBASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Gm10179-201ENSMUST00000086233 688 ntBASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sh3rf2Q8BZT2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sh3rf2Q8BZT2 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.15□□□□□ -0.47
Sh3rf2Q8BZT2 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.15□□□□□ -0.47
Sh3rf2Q8BZT2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sh3rf2Q8BZT2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sh3rf2Q8BZT2 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sh3rf2Q8BZT2 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Gm15566-201ENSMUST00000121130 590 ntBASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Gm22144-201ENSMUST00000157402 102 ntBASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Gm17391-201ENSMUST00000171036 126 ntBASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sh3rf2Q8BZT2 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms