Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm9387-201ENSMUST00000098624 1320 ntBASIC16.86■□□□□ 0.29
Usp47Q8BY87 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Usp47Q8BY87 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC16.85■□□□□ 0.29
Usp47Q8BY87 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp47Q8BY87 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp47Q8BY87 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp47Q8BY87 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp47Q8BY87 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC16.85■□□□□ 0.29
Usp47Q8BY87 Gm15573-201ENSMUST00000119487 540 ntBASIC16.85■□□□□ 0.29
Usp47Q8BY87 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC16.85■□□□□ 0.29
Usp47Q8BY87 Gm24844-201ENSMUST00000158679 127 ntBASIC16.85■□□□□ 0.29
Usp47Q8BY87 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC16.85■□□□□ 0.29
Usp47Q8BY87 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp47Q8BY87 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC16.85■□□□□ 0.29
Usp47Q8BY87 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC16.85■□□□□ 0.29
Usp47Q8BY87 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC16.85■□□□□ 0.29
Usp47Q8BY87 Gm29787-201ENSMUST00000222129 849 ntBASIC16.85■□□□□ 0.29
Usp47Q8BY87 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp47Q8BY87 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Usp47Q8BY87 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Usp47Q8BY87 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp47Q8BY87 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp47Q8BY87 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp47Q8BY87 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp47Q8BY87 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Usp47Q8BY87 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Gm8146-201ENSMUST00000192106 1847 ntBASIC16.84■□□□□ 0.29
Usp47Q8BY87 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Gm43760-201ENSMUST00000202120 3015 ntBASIC16.84■□□□□ 0.29
Usp47Q8BY87 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Usp47Q8BY87 n-R5s64-201ENSMUST00000102019 119 ntBASIC16.84■□□□□ 0.29
Usp47Q8BY87 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Mir8093-201ENSMUST00000185043 137 ntBASIC16.84■□□□□ 0.29
Usp47Q8BY87 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC16.84■□□□□ 0.29
Usp47Q8BY87 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 AC117194.1-201ENSMUST00000224847 3002 ntBASIC16.84■□□□□ 0.29
Usp47Q8BY87 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Gm14150-201ENSMUST00000122404 1354 ntBASIC16.84■□□□□ 0.29
Usp47Q8BY87 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp47Q8BY87 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Usp47Q8BY87 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Usp47Q8BY87 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp47Q8BY87 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp47Q8BY87 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp47Q8BY87 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp47Q8BY87 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp47Q8BY87 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp47Q8BY87 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp47Q8BY87 Mir8115-201ENSMUST00000184992 119 ntBASIC16.83■□□□□ 0.28
Usp47Q8BY87 Gm5982-201ENSMUST00000196234 512 ntBASIC16.83■□□□□ 0.28
Usp47Q8BY87 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC16.83■□□□□ 0.28
Usp47Q8BY87 AC129219.2-201ENSMUST00000224324 701 ntBASIC16.83■□□□□ 0.28
Usp47Q8BY87 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp47Q8BY87 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp47Q8BY87 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Usp47Q8BY87 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp47Q8BY87 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp47Q8BY87 Gm6903-201ENSMUST00000160509 1366 ntBASIC16.83■□□□□ 0.28
Usp47Q8BY87 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp47Q8BY87 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp47Q8BY87 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp47Q8BY87 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp47Q8BY87 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp47Q8BY87 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp47Q8BY87 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp47Q8BY87 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Usp47Q8BY87 Gm16166-201ENSMUST00000118291 787 ntBASIC16.82■□□□□ 0.28
Usp47Q8BY87 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp47Q8BY87 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp47Q8BY87 Gm18367-201ENSMUST00000176139 600 ntBASIC16.82■□□□□ 0.28
Usp47Q8BY87 Gm10731-201ENSMUST00000181171 448 ntBASIC16.82■□□□□ 0.28
Usp47Q8BY87 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp47Q8BY87 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC16.82■□□□□ 0.28
Usp47Q8BY87 Gm35960-201ENSMUST00000202712 767 ntBASIC16.82■□□□□ 0.28
Usp47Q8BY87 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Usp47Q8BY87 AC125486.1-201ENSMUST00000218701 320 ntBASIC16.82■□□□□ 0.28
Usp47Q8BY87 AC154849.4-201ENSMUST00000224868 365 ntBASIC16.82■□□□□ 0.28
Usp47Q8BY87 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp47Q8BY87 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp47Q8BY87 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp47Q8BY87 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms