Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Cpsf4Q8BQZ5 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Gm11930-201ENSMUST00000117788 190 ntBASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Gm28882-201ENSMUST00000185504 314 ntBASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 AA914427-201ENSMUST00000193194 1166 ntBASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Gm18056-201ENSMUST00000207670 568 ntBASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Gm18061-201ENSMUST00000208350 562 ntBASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Gm18063-201ENSMUST00000208529 568 ntBASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Gm18052-201ENSMUST00000208750 559 ntBASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4Q8BQZ5 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Gm38317-201ENSMUST00000195564 343 ntBASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Gm44958-201ENSMUST00000203734 736 ntBASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Gm44967-201ENSMUST00000207047 631 ntBASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4Q8BQZ5 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cpsf4Q8BQZ5 Gm24830-201ENSMUST00000102024 166 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms