Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sfr1Q8BP27 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Gm11989-201ENSMUST00000117240 672 ntBASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Gm11362-201ENSMUST00000118838 850 ntBASIC12.29□□□□□ -0.44
Sfr1Q8BP27 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Rprl1-201ENSMUST00000158050 327 ntBASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sfr1Q8BP27 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Cog3-203ENSMUST00000227473 4197 ntBASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Gm14130-201ENSMUST00000118417 987 ntBASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Sfr1Q8BP27 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Sfr1Q8BP27 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Sfr1Q8BP27 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Sfr1Q8BP27 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms