Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynbQ8BI41 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynbQ8BI41 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SynbQ8BI41 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SynbQ8BI41 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.53□□□□□ -0.56
SynbQ8BI41 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynbQ8BI41 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynbQ8BI41 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SynbQ8BI41 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SynbQ8BI41 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynbQ8BI41 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SynbQ8BI41 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.53□□□□□ -0.56
SynbQ8BI41 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynbQ8BI41 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynbQ8BI41 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
SynbQ8BI41 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynbQ8BI41 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynbQ8BI41 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynbQ8BI41 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynbQ8BI41 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynbQ8BI41 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SynbQ8BI41 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SynbQ8BI41 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SynbQ8BI41 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SynbQ8BI41 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
SynbQ8BI41 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SynbQ8BI41 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SynbQ8BI41 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
SynbQ8BI41 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.52□□□□□ -0.57
SynbQ8BI41 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SynbQ8BI41 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
SynbQ8BI41 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.52□□□□□ -0.57
SynbQ8BI41 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SynbQ8BI41 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SynbQ8BI41 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.52□□□□□ -0.57
SynbQ8BI41 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.52□□□□□ -0.57
SynbQ8BI41 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.52□□□□□ -0.57
SynbQ8BI41 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
SynbQ8BI41 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
SynbQ8BI41 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.52□□□□□ -0.57
SynbQ8BI41 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.52□□□□□ -0.57
SynbQ8BI41 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynbQ8BI41 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.52□□□□□ -0.57
SynbQ8BI41 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SynbQ8BI41 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynbQ8BI41 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynbQ8BI41 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynbQ8BI41 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SynbQ8BI41 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynbQ8BI41 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.52□□□□□ -0.57
SynbQ8BI41 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynbQ8BI41 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.52□□□□□ -0.57
SynbQ8BI41 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynbQ8BI41 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SynbQ8BI41 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.52□□□□□ -0.57
SynbQ8BI41 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.52□□□□□ -0.57
SynbQ8BI41 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.51□□□□□ -0.57
SynbQ8BI41 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.51□□□□□ -0.57
SynbQ8BI41 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
SynbQ8BI41 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SynbQ8BI41 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.51□□□□□ -0.57
SynbQ8BI41 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.51□□□□□ -0.57
SynbQ8BI41 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.51□□□□□ -0.57
SynbQ8BI41 Gm9230-201ENSMUST00000188228 532 ntBASIC11.51□□□□□ -0.57
SynbQ8BI41 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.51□□□□□ -0.57
SynbQ8BI41 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.51□□□□□ -0.57
SynbQ8BI41 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.51□□□□□ -0.57
SynbQ8BI41 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.51□□□□□ -0.57
SynbQ8BI41 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.51□□□□□ -0.57
SynbQ8BI41 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SynbQ8BI41 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SynbQ8BI41 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms