Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.9□□□□□ -0.5
Ubp1Q811S7 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.9□□□□□ -0.5
Ubp1Q811S7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.9□□□□□ -0.5
Ubp1Q811S7 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ubp1Q811S7 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.89□□□□□ -0.51
Ubp1Q811S7 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Gm13296-201ENSMUST00000117854 997 ntBASIC11.89□□□□□ -0.51
Ubp1Q811S7 Gm13665-201ENSMUST00000120830 528 ntBASIC11.89□□□□□ -0.51
Ubp1Q811S7 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Gm18711-201ENSMUST00000199341 750 ntBASIC11.89□□□□□ -0.51
Ubp1Q811S7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Gm44262-201ENSMUST00000204969 372 ntBASIC11.89□□□□□ -0.51
Ubp1Q811S7 Gm19187-201ENSMUST00000206781 892 ntBASIC11.89□□□□□ -0.51
Ubp1Q811S7 Gm9257-201ENSMUST00000221254 232 ntBASIC11.89□□□□□ -0.51
Ubp1Q811S7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ubp1Q811S7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.88□□□□□ -0.51
Ubp1Q811S7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.88□□□□□ -0.51
Ubp1Q811S7 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.88□□□□□ -0.51
Ubp1Q811S7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.88□□□□□ -0.51
Ubp1Q811S7 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ubp1Q811S7 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.88□□□□□ -0.51
Ubp1Q811S7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms