Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.14□□□□□ -0.31
Ush1gQ80T11 Mir7686-201ENSMUST00000200604 57 ntBASIC13.14□□□□□ -0.31
Ush1gQ80T11 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.14□□□□□ -0.31
Ush1gQ80T11 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ush1gQ80T11 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.13□□□□□ -0.31
Ush1gQ80T11 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.13□□□□□ -0.31
Ush1gQ80T11 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Gm12795-201ENSMUST00000117594 539 ntBASIC13.13□□□□□ -0.31
Ush1gQ80T11 Gm13809-201ENSMUST00000117921 597 ntBASIC13.13□□□□□ -0.31
Ush1gQ80T11 Gm7722-201ENSMUST00000120646 741 ntBASIC13.13□□□□□ -0.31
Ush1gQ80T11 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.13□□□□□ -0.31
Ush1gQ80T11 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.13□□□□□ -0.31
Ush1gQ80T11 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ush1gQ80T11 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ush1gQ80T11 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ush1gQ80T11 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ush1gQ80T11 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ush1gQ80T11 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ush1gQ80T11 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ush1gQ80T11 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ush1gQ80T11 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.12□□□□□ -0.31
Ush1gQ80T11 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ush1gQ80T11 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ush1gQ80T11 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ush1gQ80T11 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ush1gQ80T11 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ush1gQ80T11 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ush1gQ80T11 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.12□□□□□ -0.31
Ush1gQ80T11 Gm23912-201ENSMUST00000104687 87 ntBASIC13.12□□□□□ -0.31
Ush1gQ80T11 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ush1gQ80T11 Gm12857-201ENSMUST00000117678 592 ntBASIC13.12□□□□□ -0.31
Ush1gQ80T11 Mup-ps26-201ENSMUST00000121751 202 ntBASIC13.12□□□□□ -0.31
Ush1gQ80T11 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms