Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Gm5621-201ENSMUST00000187303 640 ntBASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Gm28071-201ENSMUST00000190355 478 ntBASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Gm43371-201ENSMUST00000202838 1031 ntBASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Gm44552-201ENSMUST00000205458 1247 ntBASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Gm9463-201ENSMUST00000206707 601 ntBASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Gm45398-201ENSMUST00000210561 165 ntBASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Prpf38bQ80SY5 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Gm14704-201ENSMUST00000120300 874 ntBASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Gm23218-201ENSMUST00000158124 276 ntBASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Prpf38bQ80SY5 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Gm14921-201ENSMUST00000118643 908 ntBASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Gm28975-201ENSMUST00000186412 686 ntBASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Gm42518-201ENSMUST00000196277 938 ntBASIC12.65□□□□□ -0.38
Prpf38bQ80SY5 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms