Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.19□□□□□ -0.62
Pif1Q80SX8 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Gm23119-201ENSMUST00000158610 140 ntBASIC11.19□□□□□ -0.62
Pif1Q80SX8 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Gm43184-201ENSMUST00000197247 542 ntBASIC11.19□□□□□ -0.62
Pif1Q80SX8 Gm4482-201ENSMUST00000200876 742 ntBASIC11.19□□□□□ -0.62
Pif1Q80SX8 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Gm44545-201ENSMUST00000208262 746 ntBASIC11.19□□□□□ -0.62
Pif1Q80SX8 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Gm26448-201ENSMUST00000082446 203 ntBASIC11.19□□□□□ -0.62
Pif1Q80SX8 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pif1Q80SX8 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.19□□□□□ -0.62
Pif1Q80SX8 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Pif1Q80SX8 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.18□□□□□ -0.62
Pif1Q80SX8 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Pif1Q80SX8 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.18□□□□□ -0.62
Pif1Q80SX8 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Gm7851-201ENSMUST00000117574 323 ntBASIC11.18□□□□□ -0.62
Pif1Q80SX8 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Pif1Q80SX8 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.18□□□□□ -0.62
Pif1Q80SX8 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Gm5733-201ENSMUST00000190232 939 ntBASIC11.18□□□□□ -0.62
Pif1Q80SX8 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Gm6905-201ENSMUST00000205729 511 ntBASIC11.18□□□□□ -0.62
Pif1Q80SX8 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.18□□□□□ -0.62
Pif1Q80SX8 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.18□□□□□ -0.62
Pif1Q80SX8 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.18□□□□□ -0.62
Pif1Q80SX8 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Gm10179-201ENSMUST00000086233 688 ntBASIC11.18□□□□□ -0.62
Pif1Q80SX8 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pif1Q80SX8 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms