Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.75□□□□□ -0.85
Vma21Q78T54 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.75□□□□□ -0.85
Vma21Q78T54 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC9.75□□□□□ -0.85
Vma21Q78T54 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Vma21Q78T54 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Vma21Q78T54 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.74□□□□□ -0.85
Vma21Q78T54 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Vma21Q78T54 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC9.74□□□□□ -0.85
Vma21Q78T54 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Gm5422-201ENSMUST00000050717 2721 ntBASIC9.74□□□□□ -0.85
Vma21Q78T54 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Vma21Q78T54 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Vma21Q78T54 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC9.74□□□□□ -0.85
Vma21Q78T54 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC9.74□□□□□ -0.85
Vma21Q78T54 Gm6023-201ENSMUST00000118217 606 ntBASIC9.74□□□□□ -0.85
Vma21Q78T54 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC9.74□□□□□ -0.85
Vma21Q78T54 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Gm8835-201ENSMUST00000173096 1169 ntBASIC9.74□□□□□ -0.85
Vma21Q78T54 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC9.74□□□□□ -0.85
Vma21Q78T54 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC9.74□□□□□ -0.85
Vma21Q78T54 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Gm42937-201ENSMUST00000197360 752 ntBASIC9.74□□□□□ -0.85
Vma21Q78T54 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC9.74□□□□□ -0.85
Vma21Q78T54 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Vma21Q78T54 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.74□□□□□ -0.85
Vma21Q78T54 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Gm37105-201ENSMUST00000192251 2085 ntBASIC9.74□□□□□ -0.85
Vma21Q78T54 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.74□□□□□ -0.85
Vma21Q78T54 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Vma21Q78T54 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.74□□□□□ -0.85
Vma21Q78T54 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Vma21Q78T54 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Vma21Q78T54 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Vma21Q78T54 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Vma21Q78T54 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Gm43984-201ENSMUST00000204572 2864 ntBASIC9.73□□□□□ -0.85
Vma21Q78T54 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Vma21Q78T54 Mir1247-201ENSMUST00000116706 82 ntBASIC9.73□□□□□ -0.85
Vma21Q78T54 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC9.73□□□□□ -0.85
Vma21Q78T54 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms