Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.18□□□□□ -0.46
Casc4Q6P2L7 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Casc4Q6P2L7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Map1b-203ENSMUST00000223725 2669 ntBASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Gm15808-201ENSMUST00000119046 604 ntBASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Gm45598-202ENSMUST00000210719 986 ntBASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Casc4Q6P2L7 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Gm13296-201ENSMUST00000117854 997 ntBASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Gm7722-201ENSMUST00000120646 741 ntBASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Gm26361-201ENSMUST00000158868 186 ntBASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Gm4857-201ENSMUST00000192718 785 ntBASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Casc4Q6P2L7 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms