Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
AtmQ62388 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.05□□□□□ -0.64
AtmQ62388 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
AtmQ62388 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
AtmQ62388 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
AtmQ62388 Gm12418-201ENSMUST00000118116 942 ntBASIC11.05□□□□□ -0.64
AtmQ62388 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
AtmQ62388 AC125409.3-201ENSMUST00000223488 653 ntBASIC11.05□□□□□ -0.64
AtmQ62388 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.05□□□□□ -0.64
AtmQ62388 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC11.05□□□□□ -0.64
AtmQ62388 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
AtmQ62388 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
AtmQ62388 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
AtmQ62388 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
AtmQ62388 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
AtmQ62388 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.05□□□□□ -0.64
AtmQ62388 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC11.05□□□□□ -0.64
AtmQ62388 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
AtmQ62388 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
AtmQ62388 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
AtmQ62388 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
AtmQ62388 Gm23062-201ENSMUST00000102349 110 ntBASIC11.05□□□□□ -0.64
AtmQ62388 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.05□□□□□ -0.64
AtmQ62388 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.05□□□□□ -0.64
AtmQ62388 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.05□□□□□ -0.64
AtmQ62388 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.05□□□□□ -0.64
AtmQ62388 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
AtmQ62388 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
AtmQ62388 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
AtmQ62388 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
AtmQ62388 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
AtmQ62388 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.04□□□□□ -0.64
AtmQ62388 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC11.04□□□□□ -0.64
AtmQ62388 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC11.04□□□□□ -0.64
AtmQ62388 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.04□□□□□ -0.64
AtmQ62388 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
AtmQ62388 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
AtmQ62388 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
AtmQ62388 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.04□□□□□ -0.64
AtmQ62388 Gm43106-201ENSMUST00000199485 637 ntBASIC11.04□□□□□ -0.64
AtmQ62388 Gm5507-201ENSMUST00000091897 1008 ntBASIC11.04□□□□□ -0.64
AtmQ62388 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.04□□□□□ -0.64
AtmQ62388 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
AtmQ62388 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
AtmQ62388 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.03□□□□□ -0.64
AtmQ62388 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.03□□□□□ -0.64
AtmQ62388 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.03□□□□□ -0.64
AtmQ62388 Gm13422-201ENSMUST00000118834 504 ntBASIC11.03□□□□□ -0.64
AtmQ62388 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.03□□□□□ -0.64
AtmQ62388 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.03□□□□□ -0.64
AtmQ62388 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC11.03□□□□□ -0.64
AtmQ62388 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
AtmQ62388 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.03□□□□□ -0.64
AtmQ62388 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.03□□□□□ -0.64
AtmQ62388 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
AtmQ62388 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC11.03□□□□□ -0.64
AtmQ62388 Gm13281-201ENSMUST00000120871 567 ntBASIC11.03□□□□□ -0.64
AtmQ62388 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.03□□□□□ -0.64
AtmQ62388 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.03□□□□□ -0.64
AtmQ62388 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.03□□□□□ -0.64
AtmQ62388 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 Ift43-201ENSMUST00000054565 773 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
AtmQ62388 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
AtmQ62388 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
AtmQ62388 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.03□□□□□ -0.64
AtmQ62388 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
AtmQ62388 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
AtmQ62388 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms