Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC14.17□□□□□ -0.14
Ctr9Q62018 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.17□□□□□ -0.14
Ctr9Q62018 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctr9Q62018 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ctr9Q62018 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ctr9Q62018 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.16□□□□□ -0.14
Ctr9Q62018 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.16□□□□□ -0.14
Ctr9Q62018 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.16□□□□□ -0.14
Ctr9Q62018 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.16□□□□□ -0.14
Ctr9Q62018 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.16□□□□□ -0.14
Ctr9Q62018 Gm9797-202ENSMUST00000218003 294 ntBASIC14.16□□□□□ -0.14
Ctr9Q62018 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.16□□□□□ -0.14
Ctr9Q62018 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.16□□□□□ -0.14
Ctr9Q62018 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Gm5705-201ENSMUST00000066241 711 ntBASIC14.16□□□□□ -0.14
Ctr9Q62018 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Gm21811-201ENSMUST00000096485 930 ntBASIC14.16□□□□□ -0.14
Ctr9Q62018 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC14.16□□□□□ -0.14
Ctr9Q62018 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.16□□□□□ -0.14
Ctr9Q62018 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Ctr9Q62018 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ctr9Q62018 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ctr9Q62018 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ctr9Q62018 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.15□□□□□ -0.14
Ctr9Q62018 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Ctr9Q62018 Gm13035-201ENSMUST00000117496 342 ntBASIC14.15□□□□□ -0.14
Ctr9Q62018 Gm15004-201ENSMUST00000119192 630 ntBASIC14.15□□□□□ -0.14
Ctr9Q62018 Gm15610-201ENSMUST00000120584 195 ntBASIC14.15□□□□□ -0.14
Ctr9Q62018 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.15□□□□□ -0.14
Ctr9Q62018 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.15□□□□□ -0.14
Ctr9Q62018 Gm23699-201ENSMUST00000158835 135 ntBASIC14.15□□□□□ -0.14
Ctr9Q62018 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.15□□□□□ -0.14
Ctr9Q62018 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.15□□□□□ -0.14
Ctr9Q62018 Gm17931-201ENSMUST00000208132 634 ntBASIC14.15□□□□□ -0.14
Ctr9Q62018 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC14.15□□□□□ -0.14
Ctr9Q62018 Nsd1-205ENSMUST00000224693 852 ntBASIC14.15□□□□□ -0.14
Ctr9Q62018 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.15□□□□□ -0.14
Ctr9Q62018 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.15□□□□□ -0.14
Ctr9Q62018 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ctr9Q62018 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 161.1 ms