Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col12a1Q60847 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col12a1Q60847 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col12a1Q60847 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col12a1Q60847 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col12a1Q60847 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC11.52□□□□□ -0.57
Col12a1Q60847 Mir6359-201ENSMUST00000183668 81 ntBASIC11.52□□□□□ -0.57
Col12a1Q60847 Gm44323-201ENSMUST00000198689 129 ntBASIC11.52□□□□□ -0.57
Col12a1Q60847 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Col12a1Q60847 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col12a1Q60847 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col12a1Q60847 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col12a1Q60847 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Col12a1Q60847 Gm12247-201ENSMUST00000117585 670 ntBASIC11.51□□□□□ -0.57
Col12a1Q60847 Gm11473-201ENSMUST00000118980 359 ntBASIC11.51□□□□□ -0.57
Col12a1Q60847 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC11.51□□□□□ -0.57
Col12a1Q60847 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Gm44605-201ENSMUST00000206892 949 ntBASIC11.51□□□□□ -0.57
Col12a1Q60847 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.51□□□□□ -0.57
Col12a1Q60847 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 AC103672.1-201ENSMUST00000227502 365 ntBASIC11.51□□□□□ -0.57
Col12a1Q60847 AC154213.1-201ENSMUST00000228234 583 ntBASIC11.51□□□□□ -0.57
Col12a1Q60847 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Col12a1Q60847 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.51□□□□□ -0.57
Col12a1Q60847 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.51□□□□□ -0.57
Col12a1Q60847 Gm16209-201ENSMUST00000118457 627 ntBASIC11.51□□□□□ -0.57
Col12a1Q60847 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col12a1Q60847 Gm12009-201ENSMUST00000121361 1100 ntBASIC11.51□□□□□ -0.57
Col12a1Q60847 Gm10171-201ENSMUST00000126220 628 ntBASIC11.51□□□□□ -0.57
Col12a1Q60847 Mir6387-201ENSMUST00000184042 108 ntBASIC11.51□□□□□ -0.57
Col12a1Q60847 Gm5190-201ENSMUST00000192434 357 ntBASIC11.51□□□□□ -0.57
Col12a1Q60847 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Gm10233-201ENSMUST00000089275 628 ntBASIC11.51□□□□□ -0.57
Col12a1Q60847 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Col12a1Q60847 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Zc2hc1a-203ENSMUST00000193010 1420 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col12a1Q60847 Erich3-203ENSMUST00000189969 3460 ntBASIC11.51□□□□□ -0.57
Col12a1Q60847 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Col12a1Q60847 Gm23582-201ENSMUST00000158530 139 ntBASIC11.51□□□□□ -0.57
Col12a1Q60847 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.51□□□□□ -0.57
Col12a1Q60847 AC124613.1-201ENSMUST00000198711 88 ntBASIC11.51□□□□□ -0.57
Col12a1Q60847 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.51□□□□□ -0.57
Col12a1Q60847 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.51□□□□□ -0.57
Col12a1Q60847 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC11.51□□□□□ -0.57
Col12a1Q60847 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Col12a1Q60847 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
Col12a1Q60847 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Col12a1Q60847 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.5□□□□□ -0.57
Col12a1Q60847 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.5□□□□□ -0.57
Col12a1Q60847 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Col12a1Q60847 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
Col12a1Q60847 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Col12a1Q60847 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Col12a1Q60847 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.5□□□□□ -0.57
Col12a1Q60847 Gm18124-201ENSMUST00000210695 706 ntBASIC11.5□□□□□ -0.57
Col12a1Q60847 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.5□□□□□ -0.57
Col12a1Q60847 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Mir341-201ENSMUST00000093593 96 ntBASIC11.5□□□□□ -0.57
Col12a1Q60847 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Col12a1Q60847 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Col12a1Q60847 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.5□□□□□ -0.57
Col12a1Q60847 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.5□□□□□ -0.57
Col12a1Q60847 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col12a1Q60847 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms