Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.45□□□□□ -0.58
Nr1h4Q60641 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.45□□□□□ -0.58
Nr1h4Q60641 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.45□□□□□ -0.58
Nr1h4Q60641 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Gm8738-201ENSMUST00000172606 329 ntBASIC11.45□□□□□ -0.58
Nr1h4Q60641 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.45□□□□□ -0.58
Nr1h4Q60641 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.45□□□□□ -0.58
Nr1h4Q60641 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.45□□□□□ -0.58
Nr1h4Q60641 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nr1h4Q60641 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.45□□□□□ -0.58
Nr1h4Q60641 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nr1h4Q60641 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.44□□□□□ -0.58
Nr1h4Q60641 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Gm16177-201ENSMUST00000120728 718 ntBASIC11.44□□□□□ -0.58
Nr1h4Q60641 Gm12138-201ENSMUST00000122180 951 ntBASIC11.44□□□□□ -0.58
Nr1h4Q60641 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Gm43818-201ENSMUST00000200605 466 ntBASIC11.44□□□□□ -0.58
Nr1h4Q60641 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.44□□□□□ -0.58
Nr1h4Q60641 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nr1h4Q60641 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.43□□□□□ -0.58
Nr1h4Q60641 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.43□□□□□ -0.58
Nr1h4Q60641 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nr1h4Q60641 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Nr1h4Q60641 Gm24934-201ENSMUST00000103764 111 ntBASIC11.43□□□□□ -0.58
Nr1h4Q60641 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms