Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prdm1Q60636 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prdm1Q60636 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prdm1Q60636 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Prdm1Q60636 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prdm1Q60636 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prdm1Q60636 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prdm1Q60636 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.99□□□□□ -0.17
Prdm1Q60636 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.99□□□□□ -0.17
Prdm1Q60636 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.98□□□□□ -0.17
Prdm1Q60636 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.98□□□□□ -0.17
Prdm1Q60636 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Prdm1Q60636 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Prdm1Q60636 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.98□□□□□ -0.17
Prdm1Q60636 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Prdm1Q60636 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Prdm1Q60636 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Prdm1Q60636 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Prdm1Q60636 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Prdm1Q60636 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.98□□□□□ -0.17
Prdm1Q60636 Gm12217-201ENSMUST00000118858 696 ntBASIC13.98□□□□□ -0.17
Prdm1Q60636 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.98□□□□□ -0.17
Prdm1Q60636 Gm15004-201ENSMUST00000119192 630 ntBASIC13.98□□□□□ -0.17
Prdm1Q60636 Gm12036-201ENSMUST00000120008 530 ntBASIC13.98□□□□□ -0.17
Prdm1Q60636 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Prdm1Q60636 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Gm27552-201ENSMUST00000183351 62 ntBASIC13.98□□□□□ -0.17
Prdm1Q60636 Gm27844-201ENSMUST00000183613 62 ntBASIC13.98□□□□□ -0.17
Prdm1Q60636 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Prdm1Q60636 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prdm1Q60636 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Prdm1Q60636 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.98□□□□□ -0.17
Prdm1Q60636 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Prdm1Q60636 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Prdm1Q60636 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.97□□□□□ -0.17
Prdm1Q60636 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.97□□□□□ -0.17
Prdm1Q60636 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Prdm1Q60636 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Prdm1Q60636 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.97□□□□□ -0.17
Prdm1Q60636 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.97□□□□□ -0.17
Prdm1Q60636 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.97□□□□□ -0.17
Prdm1Q60636 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.97□□□□□ -0.17
Prdm1Q60636 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Prdm1Q60636 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Prdm1Q60636 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Prdm1Q60636 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.97□□□□□ -0.17
Prdm1Q60636 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.97□□□□□ -0.17
Prdm1Q60636 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Prdm1Q60636 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.96□□□□□ -0.17
Prdm1Q60636 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.96□□□□□ -0.17
Prdm1Q60636 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Prdm1Q60636 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.96□□□□□ -0.17
Prdm1Q60636 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms