Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Satb1Q60611 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Satb1Q60611 Snora73b-201ENSMUST00000083419 205 ntBASIC12.54□□□□□ -0.4
Satb1Q60611 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Satb1Q60611 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Satb1Q60611 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Satb1Q60611 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Satb1Q60611 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Satb1Q60611 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Satb1Q60611 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Satb1Q60611 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Satb1Q60611 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Satb1Q60611 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Satb1Q60611 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.53□□□□□ -0.4
Satb1Q60611 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Satb1Q60611 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.53□□□□□ -0.4
Satb1Q60611 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Satb1Q60611 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 Gm11246-201ENSMUST00000120880 345 ntBASIC12.53□□□□□ -0.4
Satb1Q60611 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.53□□□□□ -0.4
Satb1Q60611 Gm18038-201ENSMUST00000197900 485 ntBASIC12.53□□□□□ -0.4
Satb1Q60611 Mir7686-201ENSMUST00000200604 57 ntBASIC12.53□□□□□ -0.4
Satb1Q60611 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.53□□□□□ -0.4
Satb1Q60611 Gm6905-201ENSMUST00000205729 511 ntBASIC12.53□□□□□ -0.4
Satb1Q60611 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Satb1Q60611 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.53□□□□□ -0.4
Satb1Q60611 Mir483-201ENSMUST00000093631 73 ntBASIC12.53□□□□□ -0.4
Satb1Q60611 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.53□□□□□ -0.4
Satb1Q60611 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Satb1Q60611 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.53□□□□□ -0.4
Satb1Q60611 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Satb1Q60611 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.53□□□□□ -0.4
Satb1Q60611 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Satb1Q60611 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Satb1Q60611 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.53□□□□□ -0.4
Satb1Q60611 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Satb1Q60611 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Satb1Q60611 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Satb1Q60611 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Satb1Q60611 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Satb1Q60611 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.52□□□□□ -0.41
Satb1Q60611 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Satb1Q60611 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Satb1Q60611 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Satb1Q60611 Gm11451-201ENSMUST00000118946 630 ntBASIC12.52□□□□□ -0.41
Satb1Q60611 Gm12516-201ENSMUST00000120819 385 ntBASIC12.52□□□□□ -0.41
Satb1Q60611 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.52□□□□□ -0.41
Satb1Q60611 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.52□□□□□ -0.41
Satb1Q60611 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.52□□□□□ -0.41
Satb1Q60611 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Satb1Q60611 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.52□□□□□ -0.41
Satb1Q60611 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Satb1Q60611 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Satb1Q60611 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Satb1Q60611 Gm5298-201ENSMUST00000201122 892 ntBASIC12.52□□□□□ -0.41
Satb1Q60611 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.52□□□□□ -0.41
Satb1Q60611 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.52□□□□□ -0.41
Satb1Q60611 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.52□□□□□ -0.41
Satb1Q60611 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.52□□□□□ -0.41
Satb1Q60611 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Satb1Q60611 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Satb1Q60611 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.52□□□□□ -0.41
Satb1Q60611 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Satb1Q60611 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Satb1Q60611 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Satb1Q60611 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Satb1Q60611 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Satb1Q60611 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Satb1Q60611 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Satb1Q60611 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Satb1Q60611 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Satb1Q60611 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Satb1Q60611 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Satb1Q60611 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Satb1Q60611 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Satb1Q60611 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Satb1Q60611 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Satb1Q60611 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Satb1Q60611 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Satb1Q60611 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Satb1Q60611 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Satb1Q60611 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Satb1Q60611 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Satb1Q60611 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Satb1Q60611 Gm11980-201ENSMUST00000121445 986 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 202.6 ms