Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Mir7686-201ENSMUST00000200604 57 ntBASIC14□□□□□ -0.17
Prpf38aQ4FK66 Gm10109-202ENSMUST00000206890 1211 ntBASIC14□□□□□ -0.17
Prpf38aQ4FK66 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Gm45770-201ENSMUST00000212105 616 ntBASIC14□□□□□ -0.17
Prpf38aQ4FK66 Gm7395-201ENSMUST00000216059 1045 ntBASIC14□□□□□ -0.17
Prpf38aQ4FK66 AC154849.4-201ENSMUST00000224868 365 ntBASIC14□□□□□ -0.17
Prpf38aQ4FK66 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Gm5537-201ENSMUST00000091117 1252 ntBASIC14□□□□□ -0.17
Prpf38aQ4FK66 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Prpf38aQ4FK66 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Mir6546-201ENSMUST00000184460 62 ntBASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Gm3508-201ENSMUST00000186012 792 ntBASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Gm38117-201ENSMUST00000194653 939 ntBASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Gm5714-201ENSMUST00000197343 566 ntBASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Gm6867-201ENSMUST00000219165 425 ntBASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Prpf38aQ4FK66 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Pck2-205ENSMUST00000226352 2784 ntBASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Gm13916-201ENSMUST00000117368 628 ntBASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Prpf38aQ4FK66 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 164.4 ms