Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim80Q3V061 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim80Q3V061 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.44□□□□□ -0.42
Trim80Q3V061 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Trim80Q3V061 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.43□□□□□ -0.42
Trim80Q3V061 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim80Q3V061 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.43□□□□□ -0.42
Trim80Q3V061 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.43□□□□□ -0.42
Trim80Q3V061 Gm14760-201ENSMUST00000121831 999 ntBASIC12.43□□□□□ -0.42
Trim80Q3V061 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim80Q3V061 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.43□□□□□ -0.42
Trim80Q3V061 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.43□□□□□ -0.42
Trim80Q3V061 Gm26461-201ENSMUST00000175064 290 ntBASIC12.43□□□□□ -0.42
Trim80Q3V061 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.43□□□□□ -0.42
Trim80Q3V061 Gm37466-201ENSMUST00000195692 652 ntBASIC12.43□□□□□ -0.42
Trim80Q3V061 Gm35960-201ENSMUST00000202712 767 ntBASIC12.43□□□□□ -0.42
Trim80Q3V061 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.43□□□□□ -0.42
Trim80Q3V061 Cts7-204ENSMUST00000225321 1257 ntBASIC12.43□□□□□ -0.42
Trim80Q3V061 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trim80Q3V061 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim80Q3V061 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim80Q3V061 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trim80Q3V061 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim80Q3V061 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim80Q3V061 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim80Q3V061 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim80Q3V061 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.42□□□□□ -0.42
Trim80Q3V061 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim80Q3V061 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim80Q3V061 Gm13786-201ENSMUST00000122371 333 ntBASIC12.42□□□□□ -0.42
Trim80Q3V061 Gm2231-201ENSMUST00000125661 612 ntBASIC12.42□□□□□ -0.42
Trim80Q3V061 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.42□□□□□ -0.42
Trim80Q3V061 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trim80Q3V061 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim80Q3V061 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.42□□□□□ -0.42
Trim80Q3V061 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trim80Q3V061 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Trim80Q3V061 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.42□□□□□ -0.42
Trim80Q3V061 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trim80Q3V061 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Trim80Q3V061 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trim80Q3V061 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim80Q3V061 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim80Q3V061 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.41□□□□□ -0.42
Trim80Q3V061 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trim80Q3V061 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trim80Q3V061 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim80Q3V061 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.41□□□□□ -0.42
Trim80Q3V061 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim80Q3V061 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trim80Q3V061 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Trim80Q3V061 Gm15808-201ENSMUST00000119046 604 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms