Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkl5Q3UTQ8 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.89□□□□□ -0.19
Cdkl5Q3UTQ8 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkl5Q3UTQ8 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkl5Q3UTQ8 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkl5Q3UTQ8 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Cdkl5Q3UTQ8 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cdkl5Q3UTQ8 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.88□□□□□ -0.19
Cdkl5Q3UTQ8 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Gm13350-201ENSMUST00000120519 479 ntBASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Gm25668-201ENSMUST00000157700 129 ntBASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Gm8856-201ENSMUST00000185254 1144 ntBASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Gm4607-201ENSMUST00000206649 577 ntBASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.87□□□□□ -0.19
Cdkl5Q3UTQ8 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdkl5Q3UTQ8 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdkl5Q3UTQ8 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cdkl5Q3UTQ8 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdkl5Q3UTQ8 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms