Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gm8343-201ENSMUST00000182705 994 ntBASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gm27552-201ENSMUST00000183351 62 ntBASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gm27844-201ENSMUST00000183613 62 ntBASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gm28450-201ENSMUST00000187349 638 ntBASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gm18038-201ENSMUST00000197900 485 ntBASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nlrc4Q3UP24 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Gm7857-201ENSMUST00000117957 358 ntBASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Gm12217-201ENSMUST00000118858 696 ntBASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Gm4157-201ENSMUST00000211647 679 ntBASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Gm5363-201ENSMUST00000211927 938 ntBASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Gm18730-201ENSMUST00000218038 343 ntBASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Gm5705-201ENSMUST00000066241 711 ntBASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nlrc4Q3UP24 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nlrc4Q3UP24 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms