Protein–RNA interactions for Protein: Q3ULW6

Ccdc33, Coiled-coil domain-containing protein 33, mousemouse

Predictions only

Length 985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc33Q3ULW6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Gm3332-201ENSMUST00000189337 928 ntBASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc33Q3ULW6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Gm4726-201ENSMUST00000135604 736 ntBASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Gm6019-201ENSMUST00000148369 736 ntBASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Gm8100-201ENSMUST00000182906 988 ntBASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Map1b-203ENSMUST00000223725 2669 ntBASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc33Q3ULW6 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Gm13809-201ENSMUST00000117921 597 ntBASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Gm17889-201ENSMUST00000198410 598 ntBASIC13.5□□□□□ -0.25
Ccdc33Q3ULW6 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms