Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pfdn6Q03958 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pfdn6Q03958 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.07□□□□□ -0.48
Pfdn6Q03958 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Gm5706-201ENSMUST00000181525 993 ntBASIC12.07□□□□□ -0.48
Pfdn6Q03958 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.07□□□□□ -0.48
Pfdn6Q03958 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Gm31256-201ENSMUST00000194705 506 ntBASIC12.07□□□□□ -0.48
Pfdn6Q03958 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Gm7399-201ENSMUST00000032395 858 ntBASIC12.07□□□□□ -0.48
Pfdn6Q03958 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.07□□□□□ -0.48
Pfdn6Q03958 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.07□□□□□ -0.48
Pfdn6Q03958 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pfdn6Q03958 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.06□□□□□ -0.48
Pfdn6Q03958 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Gm15610-201ENSMUST00000120584 195 ntBASIC12.06□□□□□ -0.48
Pfdn6Q03958 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Rprl1-201ENSMUST00000158050 327 ntBASIC12.06□□□□□ -0.48
Pfdn6Q03958 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Gm3096-201ENSMUST00000185770 364 ntBASIC12.06□□□□□ -0.48
Pfdn6Q03958 Gm9230-201ENSMUST00000188228 532 ntBASIC12.06□□□□□ -0.48
Pfdn6Q03958 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.06□□□□□ -0.48
Pfdn6Q03958 Gm38266-201ENSMUST00000194931 421 ntBASIC12.06□□□□□ -0.48
Pfdn6Q03958 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.06□□□□□ -0.48
Pfdn6Q03958 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.06□□□□□ -0.48
Pfdn6Q03958 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Gm42427-201ENSMUST00000200473 5292 ntBASIC12.06□□□□□ -0.48
Pfdn6Q03958 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.06□□□□□ -0.48
Pfdn6Q03958 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Pfdn6Q03958 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pfdn6Q03958 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Pfdn6Q03958 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms