Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim43cP86449 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trim43cP86449 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim43cP86449 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim43cP86449 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim43cP86449 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim43cP86449 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim43cP86449 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trim43cP86449 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim43cP86449 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.03□□□□□ -0.32
Trim43cP86449 Gm26361-201ENSMUST00000158868 186 ntBASIC13.03□□□□□ -0.32
Trim43cP86449 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim43cP86449 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim43cP86449 Gm27530-201ENSMUST00000184096 98 ntBASIC13.03□□□□□ -0.32
Trim43cP86449 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Trim43cP86449 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim43cP86449 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim43cP86449 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim43cP86449 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Trim43cP86449 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.03□□□□□ -0.32
Trim43cP86449 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim43cP86449 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43cP86449 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Trim43cP86449 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43cP86449 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43cP86449 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43cP86449 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trim43cP86449 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43cP86449 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43cP86449 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43cP86449 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43cP86449 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim43cP86449 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trim43cP86449 Gm11509-201ENSMUST00000117358 325 ntBASIC13.02□□□□□ -0.33
Trim43cP86449 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43cP86449 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim43cP86449 Gm26083-201ENSMUST00000157904 193 ntBASIC13.02□□□□□ -0.33
Trim43cP86449 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim43cP86449 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.02□□□□□ -0.33
Trim43cP86449 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.02□□□□□ -0.33
Trim43cP86449 Gm4857-201ENSMUST00000192718 785 ntBASIC13.02□□□□□ -0.33
Trim43cP86449 AY036118-201ENSMUST00000200021 923 ntBASIC13.02□□□□□ -0.33
Trim43cP86449 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43cP86449 Gm8956-201ENSMUST00000203939 825 ntBASIC13.02□□□□□ -0.33
Trim43cP86449 Gm44262-201ENSMUST00000204969 372 ntBASIC13.02□□□□□ -0.33
Trim43cP86449 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Trim43cP86449 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43cP86449 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43cP86449 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim43cP86449 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43cP86449 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43cP86449 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43cP86449 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trim43cP86449 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.02□□□□□ -0.33
Trim43cP86449 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43cP86449 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43cP86449 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trim43cP86449 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43cP86449 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43cP86449 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trim43cP86449 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.01□□□□□ -0.33
Trim43cP86449 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trim43cP86449 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.01□□□□□ -0.33
Trim43cP86449 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trim43cP86449 Gm22133-201ENSMUST00000102082 109 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms