Protein–RNA interactions for Protein: P70398

Usp9x, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, mousemouse

Known RBP Predictions only

Length 2,559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp9xP70398 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Usp9xP70398 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.91□□□□□ -0.82
Usp9xP70398 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Usp9xP70398 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Usp9xP70398 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Usp9xP70398 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Usp9xP70398 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Usp9xP70398 Mir874-201ENSMUST00000104769 76 ntBASIC9.91□□□□□ -0.82
Usp9xP70398 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC9.91□□□□□ -0.82
Usp9xP70398 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC9.91□□□□□ -0.82
Usp9xP70398 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
Usp9xP70398 CT009546.1-201ENSMUST00000222573 1120 ntBASIC9.91□□□□□ -0.82
Usp9xP70398 Gm6564-201ENSMUST00000075377 619 ntBASIC9.91□□□□□ -0.82
Usp9xP70398 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Usp9xP70398 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Usp9xP70398 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Usp9xP70398 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC9.91□□□□□ -0.82
Usp9xP70398 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Usp9xP70398 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Usp9xP70398 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Usp9xP70398 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Usp9xP70398 Gm13981-201ENSMUST00000122360 447 ntBASIC9.9□□□□□ -0.82
Usp9xP70398 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC9.9□□□□□ -0.82
Usp9xP70398 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Usp9xP70398 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.9□□□□□ -0.82
Usp9xP70398 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Usp9xP70398 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
Usp9xP70398 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Usp9xP70398 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Mir744-201ENSMUST00000103261 100 ntBASIC9.9□□□□□ -0.82
Usp9xP70398 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Usp9xP70398 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC9.9□□□□□ -0.82
Usp9xP70398 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC9.9□□□□□ -0.82
Usp9xP70398 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC9.9□□□□□ -0.82
Usp9xP70398 Gm9625-201ENSMUST00000180422 955 ntBASIC9.9□□□□□ -0.82
Usp9xP70398 Gm28833-201ENSMUST00000189671 559 ntBASIC9.9□□□□□ -0.82
Usp9xP70398 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC9.9□□□□□ -0.82
Usp9xP70398 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Gm6331-201ENSMUST00000217890 450 ntBASIC9.9□□□□□ -0.82
Usp9xP70398 AC187103.3-201ENSMUST00000225725 646 ntBASIC9.9□□□□□ -0.82
Usp9xP70398 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Usp9xP70398 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Usp9xP70398 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Usp9xP70398 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Usp9xP70398 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Usp9xP70398 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Usp9xP70398 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Usp9xP70398 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Usp9xP70398 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp9xP70398 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp9xP70398 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC9.89□□□□□ -0.83
Usp9xP70398 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Usp9xP70398 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp9xP70398 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp9xP70398 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Usp9xP70398 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC9.89□□□□□ -0.83
Usp9xP70398 Gm23769-201ENSMUST00000104441 121 ntBASIC9.89□□□□□ -0.83
Usp9xP70398 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC9.89□□□□□ -0.83
Usp9xP70398 Gm16459-201ENSMUST00000121443 686 ntBASIC9.89□□□□□ -0.83
Usp9xP70398 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Usp9xP70398 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms